BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E07SP1|AL429584
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1032 1426 0.0
>3x_Contig1032
Length = 3920
Score = 1426 bits (718), Expect = 0.0
Identities = 727/730 (99%), Gaps = 1/730 (0%)
Strand = Plus / Minus
Query: 101 gccaagttatacttaataccaaaatcgttcgttggaccacctgggttatgagaagcagta 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3920 gccaagttatacttaataccaaaatcgttcgttggaccacctgggttatgagaagcagta 3861
Query: 161 agaatgataccaccggtgcatttctcatggtaagctctaataatgtgcgaas-agctggt 219
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3860 agaatgataccaccggtgcatttctcatggtaagctctaataatgtgcgaagcagctggt 3801
Query: 220 gttgacaaaatcccattgtgaccaatgacaatcttacgaacaccgttagcagaaccaatg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800 gttgacaaaatcccattgtgaccaatgacaatcttacgaacaccgttagcagaaccaatg 3741
Query: 280 gcagcmatcttttgaatcaccacatcgttgtagtaacgaccatcaccaccaatgaccaaa 339
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3740 gcagcaatcttttgaatcaccacatcgttgtagtaacgaccatcaccaccaatgaccaaa 3681
Query: 340 gtagcaccctgagatccctcaggaatagcttccatgatggcttggatgaaattttccgta 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3680 gtagcaccctgagatccctcaggaatagcttccatgatggcttggatgaaattttccgta 3621
Query: 400 taatttggagtttcttcaaagaccttggtcttctttctcaagcccgaggtaccaggtttc 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620 taatttggagtttcttcaaagaccttggtcttctttctcaagcccgaggtaccaggtttc 3561
Query: 460 tgatctggataaggatttgtagccacagacactgttttcaatgacattattattattatt 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3560 tgatctggataaggatttgtagccacagacactgttttcaatgacattattattattatt 3501
Query: 520 attgattgttgttgtttcagataggggtagcagatacctatttccttctttgcgtttagt 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3500 attgattgttgttgtttcagataggggtagcagatacctatttccttctttgcgtttagt 3441
Query: 580 tataatgttcaatagccaatactctatcctctcctttatgttacaaaagatgtgagtatc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 tataatgttcaatagccaatactctatcctctcctttatgttacaaaagatgtgagtatc 3381
Query: 640 agtagatgttattatcagaaggaaaccttataatgcaaagtgaatgtgttcaagatgaat 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 agtagatgttattatcagaaggaaaccttataatgcaaagtgaatgtgttcaagatgaat 3321
Query: 700 gatattaattgtgcaatcaattggtttgtaaatctctgtgccaagccttaaaacaggttt 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 gatattaattgtgcaatcaattggtttgtaaatctctgtgccaagccttaaaacaggttt 3261
Query: 760 ttcgtcttgtggctcgtaattctttctgtgcttatatggaaatctcgtggtcgagaatgg 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3260 ttcgtcttgtggctcgtaattctttctgtgcttatatggaaatctcgtggtcgagaatgg 3201
Query: 820 aaagaaggga 829
||||||||||
Sbjct: 3200 aaagaaggga 3191
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7442
Number of Sequences: 1807
Number of extensions: 7442
Number of successful extensions: 264
Number of sequences better than 1.0e-20: 1
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)